Last updated: 2021-10-01

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Knit directory: BAUH_2020_MND-single-cell/

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File Version Author Date Message
Rmd 1728604 cazodi 2021-09-29 add pilot1 analysis to workflowr
html 1728604 cazodi 2021-09-29 add pilot1 analysis to workflowr
Rmd 67135d3 cazodi 2021-09-28 added initial dropletQC results
html 67135d3 cazodi 2021-09-28 added initial dropletQC results
Rmd c703e21 cazodi 2021-09-27 added workflowr pages for cell calling with emptydroplet and dropkick
html c703e21 cazodi 2021-09-27 added workflowr pages for cell calling with emptydroplet and dropkick
Rmd e5d517e cazodi 2021-08-06 dropkick figures
html e5d517e cazodi 2021-08-06 dropkick figures
html 2899feb cazodi 2021-08-06 private to public
html 6f4a1f3 cazodi 2021-08-06 different link
Rmd 679ded7 cazodi 2021-08-06 updates for davis
html 679ded7 cazodi 2021-08-06 updates for davis
Rmd b200a1f cazodi 2020-03-18 removing accidental commits by christina…
Rmd 9057b09 cazodi 2020-03-18 Revert “initial repo change”
Rmd 0c6d3c6 cazodi 2020-03-18 initial repo change
Rmd c57ac08 Christina Azodi 2019-11-26 First init
Rmd b1f309c Davis McCarthy 2019-02-06 Updating template with improvements.
Rmd d73fd37 Davis McCarthy 2019-01-10 Initial commit

Project overview

Key findings:

Pilot #1

Complete report

Pilot #2

  1. Cell calling
  2. Donor assignment
  3. Ambient RNA removal

A. HTO hashtag analysis


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This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.